PyPI · pypi:pydeseq2

pydeseq2 active

A python implementation of DESeq2.

The latest stable version of pydeseq2 is 0.5.4, published on 2026-01-23. Verified by Vigia on 2026-11-13.

Latest stable version	0.5.4
Published	2026-01-23 14:18:49 UTC
Install	`pip install --upgrade pydeseq2`
Requires	`python >=3.11`
License	—
Advisories on latest version	none known
Last verified	2026-11-13 09:47:23 UTC
Sources	pypi.org

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Maintenance

Activity	slowing down
Last stable release	2026-01-23 14:18:49 UTC · 293 days ago
Stable releases in the last 12 months	1
Published versions	31

Heuristic based only on release dates; it does not measure issue or security response times.

Version history

Version	Published
`0.5.4`	2026-01-23 14:18:49 UTC
`0.5.3`	2025-10-28 15:35:51 UTC
`0.5.2`	2025-06-26 13:42:50 UTC
`0.5.1`	2025-05-05 08:15:28 UTC
`0.5.0`	2025-01-13 10:40:48 UTC
`0.4.12`	2024-10-25 08:28:33 UTC
`0.4.11`	2024-09-04 07:30:01 UTC
`0.4.10`	2024-07-02 12:44:49 UTC
`0.4.9`	2024-04-25 09:57:05 UTC
`0.4.8`	2024-03-26 16:00:42 UTC
`0.4.7`	2024-03-01 17:56:42 UTC
`0.4.6`	2024-02-28 08:50:52 UTC
`0.4.5` withdrawn	2024-02-23 09:02:40 UTC
`0.4.4`	2023-12-08 11:20:16 UTC
`0.4.3`	2023-11-24 10:37:05 UTC
`0.4.2`	2023-11-21 16:39:20 UTC
`0.4.1`	2023-09-25 09:51:15 UTC
`0.4.0`	2023-08-07 13:41:09 UTC
`0.3.6`	2023-08-01 09:37:11 UTC
`0.3.5`	2023-06-14 13:15:50 UTC

Showing the 20 most recent of 29 versions. JSON

Version compatibility

Newest stable version that declares support for each runtime version (from the requirements published with each version).

Runtime	Newest compatible version
`python 3.8`	`0.4.4`
`python 3.9`	`0.4.12`
`python 3.10`	`0.5.2`
`python 3.11`	`0.5.4`
`python 3.12`	`0.5.4`
`python 3.13`	`0.5.4`

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Frequently asked questions

What is the latest version of pydeseq2?

The latest stable version of pydeseq2 is 0.5.4, published on 2026-01-23. Verified by Vigia on 2026-11-13.

How do I install the latest version of pydeseq2?

Run pip install --upgrade pydeseq2. The latest stable version is 0.5.4 (verified 2026-11-13).

Is pydeseq2 deprecated?

No. pydeseq2 is not marked as deprecated in the registry.

Which Python version does pydeseq2 require?

pydeseq2 0.5.4 declares this requirement: python >=3.11.

Does pydeseq2 0.5.4 have known vulnerabilities?

No known advisories affect pydeseq2 0.5.4 according to the data Vigia checks.

Is pydeseq2 still maintained?

pydeseq2 published 1 stable releases in the last 12 months; the most recent was 293 days ago. Activity: slowing down.

Observed changes

No changes observed yet since Vigia started tracking this package.

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